Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smndc1Q8BGT7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Gm9988-201ENSMUST00000069786 435 ntBASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smndc1Q8BGT7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smndc1Q8BGT7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smndc1Q8BGT7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smndc1Q8BGT7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms