Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Mzt1-203ENSMUST00000227948 952 ntBASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trnp1Q80ZI1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trnp1Q80ZI1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trnp1Q80ZI1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.08■□□□□ 0.8
Trnp1Q80ZI1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trnp1Q80ZI1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trnp1Q80ZI1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm6623-201ENSMUST00000173570 544 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm10566-201ENSMUST00000086739 996 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.06■□□□□ 0.8
Trnp1Q80ZI1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Gm29791-202ENSMUST00000207888 369 ntBASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trnp1Q80ZI1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Gm43514-201ENSMUST00000198852 424 ntBASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trnp1Q80ZI1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trnp1Q80ZI1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trnp1Q80ZI1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms