Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Upk3bQ80YF6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Upk3bQ80YF6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Upk3bQ80YF6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Upk3bQ80YF6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.04■□□□□ -0
Upk3bQ80YF6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.04■□□□□ -0
Upk3bQ80YF6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.04■□□□□ -0
Upk3bQ80YF6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Upk3bQ80YF6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Upk3bQ80YF6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Upk3bQ80YF6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.03■□□□□ -0
Upk3bQ80YF6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Upk3bQ80YF6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Upk3bQ80YF6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Upk3bQ80YF6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Upk3bQ80YF6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Upk3bQ80YF6 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.02■□□□□ -0
Upk3bQ80YF6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Upk3bQ80YF6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.02■□□□□ -0
Upk3bQ80YF6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Gm13234-201ENSMUST00000120010 747 ntBASIC15.02■□□□□ -0
Upk3bQ80YF6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Upk3bQ80YF6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Upk3bQ80YF6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upk3bQ80YF6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upk3bQ80YF6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Upk3bQ80YF6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.01□□□□□ -0.01
Upk3bQ80YF6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Upk3bQ80YF6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Upk3bQ80YF6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Upk3bQ80YF6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Upk3bQ80YF6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Upk3bQ80YF6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15□□□□□ -0.01
Upk3bQ80YF6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Upk3bQ80YF6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms