Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3tc2Q80VA5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3tc2Q80VA5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3tc2Q80VA5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3tc2Q80VA5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Sh3tc2Q80VA5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Gm10013-201ENSMUST00000106074 672 ntBASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Gm10517-202ENSMUST00000192970 758 ntBASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3tc2Q80VA5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3tc2Q80VA5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3tc2Q80VA5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Gm6345-202ENSMUST00000180900 204 ntBASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Sh3tc2Q80VA5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 AA414768-201ENSMUST00000121924 1257 ntBASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Mir6349-201ENSMUST00000184059 97 ntBASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3tc2Q80VA5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms