Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rpp38Q80UU2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Rpp38Q80UU2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.73■□□□□ 0.43
Rpp38Q80UU2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gm6576-201ENSMUST00000169678 883 ntBASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp38Q80UU2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rpp38Q80UU2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Gm37292-201ENSMUST00000192062 758 ntBASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp38Q80UU2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms