Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lca5Q80ST9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lca5Q80ST9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lca5Q80ST9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Gm3375-201ENSMUST00000203929 796 ntBASIC20.27■□□□□ 0.84
Lca5Q80ST9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lca5Q80ST9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lca5Q80ST9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lca5Q80ST9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lca5Q80ST9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Lca5Q80ST9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Lca5Q80ST9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lca5Q80ST9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lca5Q80ST9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.24■□□□□ 0.83
Lca5Q80ST9 Gm5417-201ENSMUST00000079706 384 ntBASIC20.24■□□□□ 0.83
Lca5Q80ST9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lca5Q80ST9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.23■□□□□ 0.83
Lca5Q80ST9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.23■□□□□ 0.83
Lca5Q80ST9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lca5Q80ST9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.22■□□□□ 0.83
Lca5Q80ST9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lca5Q80ST9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Lca5Q80ST9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lca5Q80ST9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms