Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdp1Q7TSG2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdp1Q7TSG2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Ctdp1Q7TSG2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdp1Q7TSG2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdp1Q7TSG2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdp1Q7TSG2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.35■□□□□ 0.69
Ctdp1Q7TSG2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdp1Q7TSG2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdp1Q7TSG2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdp1Q7TSG2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctdp1Q7TSG2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms