Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ShprhQ7TPQ3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Mir8112-201ENSMUST00000184382 131 ntBASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ShprhQ7TPQ3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
ShprhQ7TPQ3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Actl10-202ENSMUST00000226583 1501 ntBASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ShprhQ7TPQ3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ShprhQ7TPQ3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ShprhQ7TPQ3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Gm37722-201ENSMUST00000193757 208 ntBASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ShprhQ7TPQ3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Gm7461-201ENSMUST00000058918 827 ntBASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC25.26■■□□□ 1.63
ShprhQ7TPQ3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC25.25■■□□□ 1.63
ShprhQ7TPQ3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
ShprhQ7TPQ3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
ShprhQ7TPQ3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC25.25■■□□□ 1.63
ShprhQ7TPQ3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ShprhQ7TPQ3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Gm11355-201ENSMUST00000121120 306 ntBASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ShprhQ7TPQ3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Gm7153-201ENSMUST00000117092 455 ntBASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Gm43231-201ENSMUST00000202960 2258 ntBASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ShprhQ7TPQ3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms