Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vma21Q78T54 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vma21Q78T54 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vma21Q78T54 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vma21Q78T54 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vma21Q78T54 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.49□□□□□ -0.09
Vma21Q78T54 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.48□□□□□ -0.09
Vma21Q78T54 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.48□□□□□ -0.09
Vma21Q78T54 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Vma21Q78T54 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.48□□□□□ -0.09
Vma21Q78T54 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.48□□□□□ -0.09
Vma21Q78T54 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.48□□□□□ -0.09
Vma21Q78T54 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.48□□□□□ -0.09
Vma21Q78T54 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Vma21Q78T54 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vma21Q78T54 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vma21Q78T54 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.47□□□□□ -0.09
Vma21Q78T54 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.47□□□□□ -0.09
Vma21Q78T54 Gm6420-201ENSMUST00000193885 723 ntBASIC14.47□□□□□ -0.09
Vma21Q78T54 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.47□□□□□ -0.09
Vma21Q78T54 Gm10493-201ENSMUST00000097270 612 ntBASIC14.47□□□□□ -0.09
Vma21Q78T54 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vma21Q78T54 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Vma21Q78T54 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vma21Q78T54 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vma21Q78T54 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.46□□□□□ -0.09
Vma21Q78T54 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Nespas-201ENSMUST00000143738 1083 ntBASIC14.46□□□□□ -0.09
Vma21Q78T54 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vma21Q78T54 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vma21Q78T54 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vma21Q78T54 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Vma21Q78T54 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Vma21Q78T54 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vma21Q78T54 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vma21Q78T54 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vma21Q78T54 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Vma21Q78T54 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vma21Q78T54 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Vma21Q78T54 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.44□□□□□ -0.1
Vma21Q78T54 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vma21Q78T54 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms