Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssx9Q6XAS3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Mir5133-201ENSMUST00000174955 77 ntBASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Gm26524-201ENSMUST00000192339 390 ntBASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssx9Q6XAS3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssx9Q6XAS3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssx9Q6XAS3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Rab3c-203ENSMUST00000224180 967 ntBASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssx9Q6XAS3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ssx9Q6XAS3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ssx9Q6XAS3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssx9Q6XAS3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ssx9Q6XAS3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms