Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx58Q6Q899 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ddx58Q6Q899 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx58Q6Q899 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx58Q6Q899 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Gm7889-201ENSMUST00000185591 958 ntBASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx58Q6Q899 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Gm27463-201ENSMUST00000183569 57 ntBASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx58Q6Q899 Fst-202ENSMUST00000223640 2612 ntBASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx58Q6Q899 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Gm24841-201ENSMUST00000158676 357 ntBASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx58Q6Q899 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx58Q6Q899 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx58Q6Q899 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx58Q6Q899 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx58Q6Q899 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx58Q6Q899 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx58Q6Q899 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms