Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtifQ6PEE2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtifQ6PEE2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CtifQ6PEE2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.94■□□□□ 0.62
CtifQ6PEE2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.94■□□□□ 0.62
CtifQ6PEE2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.94■□□□□ 0.62
CtifQ6PEE2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CtifQ6PEE2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.93■□□□□ 0.62
CtifQ6PEE2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CtifQ6PEE2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CtifQ6PEE2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.91■□□□□ 0.62
CtifQ6PEE2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.91■□□□□ 0.62
CtifQ6PEE2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CtifQ6PEE2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.9■□□□□ 0.62
CtifQ6PEE2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CtifQ6PEE2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CtifQ6PEE2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CtifQ6PEE2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CtifQ6PEE2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CtifQ6PEE2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CtifQ6PEE2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CtifQ6PEE2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CtifQ6PEE2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
CtifQ6PEE2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms