Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf220Q6PDX6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Gm12251-201ENSMUST00000117893 792 ntBASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf220Q6PDX6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf220Q6PDX6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Gm13241-201ENSMUST00000094493 780 ntBASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf220Q6PDX6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf220Q6PDX6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms