Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Fst-202ENSMUST00000223640 2612 ntBASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Gm30025-201ENSMUST00000218555 728 ntBASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kdm3aQ6PCM1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Gm38027-201ENSMUST00000192315 235 ntBASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Idnk-204ENSMUST00000226010 1898 ntBASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Kdm3aQ6PCM1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kdm3aQ6PCM1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Kdm3aQ6PCM1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kdm3aQ6PCM1 Gm12085-201ENSMUST00000119263 940 ntBASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Gm24841-201ENSMUST00000158676 357 ntBASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kdm3aQ6PCM1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Kdm3aQ6PCM1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms