Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herc4Q6PAV2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herc4Q6PAV2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herc4Q6PAV2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Idnk-204ENSMUST00000226010 1898 ntBASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herc4Q6PAV2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.59■□□□□ 0.73
Herc4Q6PAV2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herc4Q6PAV2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herc4Q6PAV2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Herc4Q6PAV2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herc4Q6PAV2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
Herc4Q6PAV2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herc4Q6PAV2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms