Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Gm11643-201ENSMUST00000119578 864 ntBASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp50Q6P8X6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp50Q6P8X6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Idnk-204ENSMUST00000226010 1898 ntBASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp50Q6P8X6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.46■□□□□ 0.87
Usp50Q6P8X6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Gm29791-202ENSMUST00000207888 369 ntBASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp50Q6P8X6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Gm12085-201ENSMUST00000119263 940 ntBASIC20.45■□□□□ 0.86
Usp50Q6P8X6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp50Q6P8X6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp50Q6P8X6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Gm3375-201ENSMUST00000203929 796 ntBASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp50Q6P8X6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms