Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcf1Q6P542 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcf1Q6P542 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcf1Q6P542 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcf1Q6P542 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcf1Q6P542 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Nespas-201ENSMUST00000143738 1083 ntBASIC19.88■□□□□ 0.77
Abcf1Q6P542 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Abcf1Q6P542 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.87■□□□□ 0.77
Abcf1Q6P542 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcf1Q6P542 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.86■□□□□ 0.77
Abcf1Q6P542 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcf1Q6P542 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Abcf1Q6P542 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.84■□□□□ 0.77
Abcf1Q6P542 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Mir5133-201ENSMUST00000174955 77 ntBASIC19.84■□□□□ 0.77
Abcf1Q6P542 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Gm6365-201ENSMUST00000054711 744 ntBASIC19.84■□□□□ 0.77
Abcf1Q6P542 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcf1Q6P542 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.83■□□□□ 0.77
Abcf1Q6P542 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Abcf1Q6P542 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcf1Q6P542 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms