Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtl3Q6P1Y1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Gm15378-201ENSMUST00000121894 207 ntBASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtl3Q6P1Y1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.33■□□□□ 0.53
Rtl3Q6P1Y1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rtl3Q6P1Y1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtl3Q6P1Y1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtl3Q6P1Y1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtl3Q6P1Y1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Mir6349-201ENSMUST00000184059 97 ntBASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.33■□□□□ 0.52
Rtl3Q6P1Y1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Gm18025-201ENSMUST00000221733 862 ntBASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtl3Q6P1Y1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtl3Q6P1Y1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rtl3Q6P1Y1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rtl3Q6P1Y1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl3Q6P1Y1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl3Q6P1Y1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl3Q6P1Y1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtl3Q6P1Y1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms