Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Krt40Q6IFX3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Krt40Q6IFX3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.95■□□□□ 0.94
Krt40Q6IFX3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Krt40Q6IFX3 Idnk-204ENSMUST00000226010 1898 ntBASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Gm24841-201ENSMUST00000158676 357 ntBASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Gm10231-201ENSMUST00000181584 441 ntBASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Gm10175-202ENSMUST00000208752 441 ntBASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt40Q6IFX3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt40Q6IFX3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Gm27463-201ENSMUST00000183569 57 ntBASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Gm7889-201ENSMUST00000185591 958 ntBASIC20.92■□□□□ 0.94
Krt40Q6IFX3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt40Q6IFX3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt40Q6IFX3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.9■□□□□ 0.94
Krt40Q6IFX3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms