Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Six2Q62232 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Six2Q62232 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.95■□□□□ 0.62
Six2Q62232 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Six2Q62232 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.94■□□□□ 0.62
Six2Q62232 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.94■□□□□ 0.62
Six2Q62232 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Six2Q62232 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six2Q62232 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.93■□□□□ 0.62
Six2Q62232 Gm27275-201ENSMUST00000184318 272 ntBASIC18.93■□□□□ 0.62
Six2Q62232 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six2Q62232 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.92■□□□□ 0.62
Six2Q62232 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Six2Q62232 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.92■□□□□ 0.62
Six2Q62232 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six2Q62232 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six2Q62232 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.91■□□□□ 0.62
Six2Q62232 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six2Q62232 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six2Q62232 Gm10138-203ENSMUST00000206952 366 ntBASIC18.91■□□□□ 0.62
Six2Q62232 Gm20049-201ENSMUST00000219950 730 ntBASIC18.91■□□□□ 0.62
Six2Q62232 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.91■□□□□ 0.62
Six2Q62232 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.91■□□□□ 0.62
Six2Q62232 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Six2Q62232 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six2Q62232 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six2Q62232 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.9■□□□□ 0.62
Six2Q62232 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.9■□□□□ 0.62
Six2Q62232 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.9■□□□□ 0.62
Six2Q62232 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.9■□□□□ 0.62
Six2Q62232 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.9■□□□□ 0.62
Six2Q62232 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.9■□□□□ 0.62
Six2Q62232 Mir6349-201ENSMUST00000184059 97 ntBASIC18.9■□□□□ 0.62
Six2Q62232 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six2Q62232 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Six2Q62232 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Six2Q62232 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Six2Q62232 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Gm10418-201ENSMUST00000100943 576 ntBASIC18.89■□□□□ 0.61
Six2Q62232 Gm15375-201ENSMUST00000119510 849 ntBASIC18.89■□□□□ 0.61
Six2Q62232 Gm12441-201ENSMUST00000121806 588 ntBASIC18.89■□□□□ 0.61
Six2Q62232 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.89■□□□□ 0.61
Six2Q62232 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.89■□□□□ 0.61
Six2Q62232 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six2Q62232 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Six2Q62232 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six2Q62232 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms