Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.17■□□□□ 0.34
Rai1Q61818 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rai1Q61818 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.17■□□□□ 0.34
Rai1Q61818 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.16■□□□□ 0.34
Rai1Q61818 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Rai1Q61818 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rai1Q61818 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
Rai1Q61818 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Gm25016-201ENSMUST00000158399 131 ntBASIC17.16■□□□□ 0.34
Rai1Q61818 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.16■□□□□ 0.34
Rai1Q61818 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rai1Q61818 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Rai1Q61818 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.15■□□□□ 0.34
Rai1Q61818 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
Rai1Q61818 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Golph3-205ENSMUST00000228671 2842 ntBASIC17.15■□□□□ 0.34
Rai1Q61818 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.15■□□□□ 0.34
Rai1Q61818 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rai1Q61818 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rai1Q61818 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.14■□□□□ 0.33
Rai1Q61818 Gm28033-201ENSMUST00000184224 96 ntBASIC17.14■□□□□ 0.33
Rai1Q61818 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.14■□□□□ 0.33
Rai1Q61818 Gm17807-201ENSMUST00000186869 298 ntBASIC17.14■□□□□ 0.33
Rai1Q61818 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Il3ra-202ENSMUST00000223589 738 ntBASIC17.14■□□□□ 0.33
Rai1Q61818 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.14■□□□□ 0.33
Rai1Q61818 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rai1Q61818 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rai1Q61818 Gm29518-201ENSMUST00000190858 372 ntBASIC17.14■□□□□ 0.33
Rai1Q61818 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rai1Q61818 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rai1Q61818 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rai1Q61818 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rai1Q61818 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.13■□□□□ 0.33
Rai1Q61818 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rai1Q61818 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.12■□□□□ 0.33
Rai1Q61818 Gm17808-201ENSMUST00000200859 894 ntBASIC17.12■□□□□ 0.33
Rai1Q61818 Gm21559-201ENSMUST00000220638 855 ntBASIC17.12■□□□□ 0.33
Rai1Q61818 Gm8587-201ENSMUST00000076538 843 ntBASIC17.12■□□□□ 0.33
Rai1Q61818 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rai1Q61818 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rai1Q61818 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
Rai1Q61818 Gm27389-201ENSMUST00000183622 195 ntBASIC17.12■□□□□ 0.33
Rai1Q61818 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rai1Q61818 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.12■□□□□ 0.33
Rai1Q61818 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.11■□□□□ 0.33
Rai1Q61818 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rai1Q61818 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Rai1Q61818 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rai1Q61818 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 651.9 ms