Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Foxn1Q61575 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.3■□□□□ 0.84
Foxn1Q61575 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Foxn1Q61575 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Foxn1Q61575 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Foxn1Q61575 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Foxn1Q61575 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Gm27525-201ENSMUST00000184465 107 ntBASIC20.29■□□□□ 0.84
Foxn1Q61575 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Foxn1Q61575 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Foxn1Q61575 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.28■□□□□ 0.84
Foxn1Q61575 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.28■□□□□ 0.84
Foxn1Q61575 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Foxn1Q61575 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.27■□□□□ 0.84
Foxn1Q61575 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Foxn1Q61575 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.27■□□□□ 0.84
Foxn1Q61575 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.27■□□□□ 0.84
Foxn1Q61575 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Foxn1Q61575 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Foxn1Q61575 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Foxn1Q61575 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.26■□□□□ 0.83
Foxn1Q61575 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Foxn1Q61575 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Foxn1Q61575 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.25■□□□□ 0.83
Foxn1Q61575 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.25■□□□□ 0.83
Foxn1Q61575 Gm18206-201ENSMUST00000207027 926 ntBASIC20.25■□□□□ 0.83
Foxn1Q61575 Gm45328-201ENSMUST00000210942 917 ntBASIC20.25■□□□□ 0.83
Foxn1Q61575 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Foxn1Q61575 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.24■□□□□ 0.83
Foxn1Q61575 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm26039-201ENSMUST00000158152 144 ntBASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Foxn1Q61575 Gm43347-201ENSMUST00000200226 580 ntBASIC20.24■□□□□ 0.83
Foxn1Q61575 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.24■□□□□ 0.83
Foxn1Q61575 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Foxn1Q61575 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Foxn1Q61575 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Foxn1Q61575 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms