Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
Vsx2Q61412 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.32■□□□□ 0.36
Vsx2Q61412 Gm37856-201ENSMUST00000191634 999 ntBASIC17.32■□□□□ 0.36
Vsx2Q61412 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.32■□□□□ 0.36
Vsx2Q61412 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx2Q61412 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx2Q61412 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx2Q61412 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx2Q61412 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vsx2Q61412 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vsx2Q61412 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.31■□□□□ 0.36
Vsx2Q61412 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Vsx2Q61412 Gm27275-201ENSMUST00000184318 272 ntBASIC17.31■□□□□ 0.36
Vsx2Q61412 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.31■□□□□ 0.36
Vsx2Q61412 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.31■□□□□ 0.36
Vsx2Q61412 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.31■□□□□ 0.36
Vsx2Q61412 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vsx2Q61412 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vsx2Q61412 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Gm2399-201ENSMUST00000104944 225 ntBASIC17.3■□□□□ 0.36
Vsx2Q61412 Gm20760-201ENSMUST00000179197 648 ntBASIC17.3■□□□□ 0.36
Vsx2Q61412 Trmt13-210ENSMUST00000198454 880 ntBASIC17.3■□□□□ 0.36
Vsx2Q61412 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vsx2Q61412 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Vsx2Q61412 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Vsx2Q61412 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vsx2Q61412 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
Vsx2Q61412 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.29■□□□□ 0.36
Vsx2Q61412 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.28■□□□□ 0.36
Vsx2Q61412 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.28■□□□□ 0.36
Vsx2Q61412 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vsx2Q61412 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.27■□□□□ 0.36
Vsx2Q61412 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vsx2Q61412 Dio3-201ENSMUST00000097228 1449 ntBASIC17.27■□□□□ 0.35
Vsx2Q61412 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx2Q61412 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx2Q61412 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vsx2Q61412 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Vsx2Q61412 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.26■□□□□ 0.35
Vsx2Q61412 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.26■□□□□ 0.35
Vsx2Q61412 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.26■□□□□ 0.35
Vsx2Q61412 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vsx2Q61412 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vsx2Q61412 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vsx2Q61412 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Vsx2Q61412 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.25■□□□□ 0.35
Vsx2Q61412 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vsx2Q61412 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vsx2Q61412 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms