Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ift88Q61371 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Ift88Q61371 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.67■□□□□ 0.74
Ift88Q61371 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.67■□□□□ 0.74
Ift88Q61371 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.67■□□□□ 0.74
Ift88Q61371 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.67■□□□□ 0.74
Ift88Q61371 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.67■□□□□ 0.74
Ift88Q61371 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift88Q61371 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Ift88Q61371 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ift88Q61371 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.66■□□□□ 0.74
Ift88Q61371 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift88Q61371 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.65■□□□□ 0.74
Ift88Q61371 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ift88Q61371 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.65■□□□□ 0.74
Ift88Q61371 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift88Q61371 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ift88Q61371 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ift88Q61371 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ift88Q61371 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ift88Q61371 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ift88Q61371 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ift88Q61371 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.64■□□□□ 0.73
Ift88Q61371 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ift88Q61371 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ift88Q61371 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ift88Q61371 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.63■□□□□ 0.73
Ift88Q61371 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.63■□□□□ 0.73
Ift88Q61371 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.63■□□□□ 0.73
Ift88Q61371 Gm18671-201ENSMUST00000214826 683 ntBASIC19.63■□□□□ 0.73
Ift88Q61371 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift88Q61371 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ift88Q61371 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ift88Q61371 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ift88Q61371 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.62■□□□□ 0.73
Ift88Q61371 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.62■□□□□ 0.73
Ift88Q61371 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift88Q61371 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift88Q61371 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms