Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.92■□□□□ 0.46
Six4Q61321 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
Six4Q61321 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Gm22240-201ENSMUST00000175225 82 ntBASIC17.92■□□□□ 0.46
Six4Q61321 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.92■□□□□ 0.46
Six4Q61321 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six4Q61321 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.91■□□□□ 0.46
Six4Q61321 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.91■□□□□ 0.46
Six4Q61321 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.91■□□□□ 0.46
Six4Q61321 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.91■□□□□ 0.46
Six4Q61321 Gm15378-201ENSMUST00000121894 207 ntBASIC17.91■□□□□ 0.46
Six4Q61321 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Gm43183-201ENSMUST00000200632 547 ntBASIC17.91■□□□□ 0.46
Six4Q61321 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.91■□□□□ 0.46
Six4Q61321 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Six4Q61321 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Six4Q61321 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six4Q61321 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Six4Q61321 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.9■□□□□ 0.46
Six4Q61321 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.9■□□□□ 0.46
Six4Q61321 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
Six4Q61321 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six4Q61321 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six4Q61321 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Six4Q61321 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
Six4Q61321 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.89■□□□□ 0.45
Six4Q61321 Gm11643-201ENSMUST00000119578 864 ntBASIC17.89■□□□□ 0.45
Six4Q61321 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six4Q61321 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six4Q61321 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six4Q61321 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six4Q61321 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Six4Q61321 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six4Q61321 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Gm10418-201ENSMUST00000100943 576 ntBASIC17.88■□□□□ 0.45
Six4Q61321 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.88■□□□□ 0.45
Six4Q61321 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.88■□□□□ 0.45
Six4Q61321 Gm6576-201ENSMUST00000169678 883 ntBASIC17.88■□□□□ 0.45
Six4Q61321 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.88■□□□□ 0.45
Six4Q61321 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Six4Q61321 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six4Q61321 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.87■□□□□ 0.45
Six4Q61321 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Six4Q61321 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six4Q61321 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.87■□□□□ 0.45
Six4Q61321 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Six4Q61321 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six4Q61321 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six4Q61321 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six4Q61321 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six4Q61321 Gm12382-201ENSMUST00000122005 922 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms