Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.21■□□□□ 0.03
Clns1aQ61189 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.21■□□□□ 0.03
Clns1aQ61189 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.21■□□□□ 0.03
Clns1aQ61189 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.21■□□□□ 0.03
Clns1aQ61189 Gm43137-201ENSMUST00000198052 594 ntBASIC15.21■□□□□ 0.03
Clns1aQ61189 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Clns1aQ61189 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clns1aQ61189 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.21■□□□□ 0.03
Clns1aQ61189 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clns1aQ61189 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Clns1aQ61189 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Clns1aQ61189 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.2■□□□□ 0.02
Clns1aQ61189 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Clns1aQ61189 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.2■□□□□ 0.02
Clns1aQ61189 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clns1aQ61189 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.19■□□□□ 0.02
Clns1aQ61189 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.19■□□□□ 0.02
Clns1aQ61189 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.19■□□□□ 0.02
Clns1aQ61189 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clns1aQ61189 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.18■□□□□ 0.02
Clns1aQ61189 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Clns1aQ61189 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clns1aQ61189 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clns1aQ61189 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Smad6-203ENSMUST00000179458 273 ntBASIC15.17■□□□□ 0.02
Clns1aQ61189 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clns1aQ61189 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms