Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.86□□□□□ -0.03
Foxf1Q61080 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.86□□□□□ -0.03
Foxf1Q61080 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.86□□□□□ -0.03
Foxf1Q61080 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.86□□□□□ -0.03
Foxf1Q61080 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Foxf1Q61080 Gm4968-201ENSMUST00000071458 858 ntBASIC14.86□□□□□ -0.03
Foxf1Q61080 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxf1Q61080 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.85□□□□□ -0.03
Foxf1Q61080 Flg-201ENSMUST00000050758 1488 ntBASIC14.85□□□□□ -0.03
Foxf1Q61080 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Foxf1Q61080 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.85□□□□□ -0.03
Foxf1Q61080 Gm38285-201ENSMUST00000192928 922 ntBASIC14.85□□□□□ -0.03
Foxf1Q61080 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Foxf1Q61080 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxf1Q61080 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.84□□□□□ -0.03
Foxf1Q61080 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxf1Q61080 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.84□□□□□ -0.03
Foxf1Q61080 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.84□□□□□ -0.03
Foxf1Q61080 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Foxf1Q61080 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxf1Q61080 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.84□□□□□ -0.03
Foxf1Q61080 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxf1Q61080 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxf1Q61080 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxf1Q61080 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxf1Q61080 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.83□□□□□ -0.04
Foxf1Q61080 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Foxf1Q61080 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Zfp783-201ENSMUST00000095946 670 ntBASIC14.83□□□□□ -0.04
Foxf1Q61080 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Foxf1Q61080 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Foxf1Q61080 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.83□□□□□ -0.04
Foxf1Q61080 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxf1Q61080 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.82□□□□□ -0.04
Foxf1Q61080 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.82□□□□□ -0.04
Foxf1Q61080 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Foxf1Q61080 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxf1Q61080 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms