Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trpc1Q61056 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.31■□□□□ 0.36
Trpc1Q61056 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trpc1Q61056 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
Trpc1Q61056 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trpc1Q61056 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.3■□□□□ 0.36
Trpc1Q61056 Gm8969-201ENSMUST00000199694 526 ntBASIC17.3■□□□□ 0.36
Trpc1Q61056 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.3■□□□□ 0.36
Trpc1Q61056 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trpc1Q61056 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trpc1Q61056 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Gm37179-201ENSMUST00000194862 823 ntBASIC17.29■□□□□ 0.36
Trpc1Q61056 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trpc1Q61056 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
Trpc1Q61056 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.28■□□□□ 0.36
Trpc1Q61056 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trpc1Q61056 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.27■□□□□ 0.36
Trpc1Q61056 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.27■□□□□ 0.36
Trpc1Q61056 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trpc1Q61056 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trpc1Q61056 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.27■□□□□ 0.36
Trpc1Q61056 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trpc1Q61056 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trpc1Q61056 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trpc1Q61056 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trpc1Q61056 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trpc1Q61056 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.26■□□□□ 0.35
Trpc1Q61056 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.26■□□□□ 0.35
Trpc1Q61056 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trpc1Q61056 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trpc1Q61056 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trpc1Q61056 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trpc1Q61056 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trpc1Q61056 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms