Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Gm10418-201ENSMUST00000100943 576 ntBASIC17.61■□□□□ 0.41
Col12a1Q60847 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.61■□□□□ 0.41
Col12a1Q60847 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col12a1Q60847 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.61■□□□□ 0.41
Col12a1Q60847 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col12a1Q60847 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col12a1Q60847 Actl10-202ENSMUST00000226583 1501 ntBASIC17.61■□□□□ 0.41
Col12a1Q60847 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col12a1Q60847 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Col12a1Q60847 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.61■□□□□ 0.41
Col12a1Q60847 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col12a1Q60847 Gm4974-201ENSMUST00000209974 875 ntBASIC17.61■□□□□ 0.41
Col12a1Q60847 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col12a1Q60847 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.6■□□□□ 0.41
Col12a1Q60847 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.6■□□□□ 0.41
Col12a1Q60847 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col12a1Q60847 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.6■□□□□ 0.41
Col12a1Q60847 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col12a1Q60847 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col12a1Q60847 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.59■□□□□ 0.41
Col12a1Q60847 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.59■□□□□ 0.41
Col12a1Q60847 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.59■□□□□ 0.41
Col12a1Q60847 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col12a1Q60847 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Col12a1Q60847 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.58■□□□□ 0.41
Col12a1Q60847 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.58■□□□□ 0.41
Col12a1Q60847 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col12a1Q60847 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.58■□□□□ 0.41
Col12a1Q60847 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col12a1Q60847 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col12a1Q60847 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col12a1Q60847 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.58■□□□□ 0.4
Col12a1Q60847 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.58■□□□□ 0.4
Col12a1Q60847 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col12a1Q60847 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col12a1Q60847 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.57■□□□□ 0.4
Col12a1Q60847 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.57■□□□□ 0.4
Col12a1Q60847 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.57■□□□□ 0.4
Col12a1Q60847 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.57■□□□□ 0.4
Col12a1Q60847 Gm26039-201ENSMUST00000158152 144 ntBASIC17.57■□□□□ 0.4
Col12a1Q60847 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.57■□□□□ 0.4
Col12a1Q60847 Gm43575-201ENSMUST00000196420 516 ntBASIC17.57■□□□□ 0.4
Col12a1Q60847 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.57■□□□□ 0.4
Col12a1Q60847 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col12a1Q60847 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col12a1Q60847 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col12a1Q60847 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.56■□□□□ 0.4
Col12a1Q60847 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.56■□□□□ 0.4
Col12a1Q60847 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.56■□□□□ 0.4
Col12a1Q60847 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.56■□□□□ 0.4
Col12a1Q60847 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.56■□□□□ 0.4
Col12a1Q60847 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col12a1Q60847 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms