Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Gm11643-201ENSMUST00000119578 864 ntBASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-4Q5R1I0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6d-4Q5R1I0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Gm10418-201ENSMUST00000100943 576 ntBASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6d-4Q5R1I0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.88□□□□□ -0.03
Trav6d-4Q5R1I0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms