Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7d-4Q5R1H9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Gm7417-201ENSMUST00000192950 473 ntBASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav7d-4Q5R1H9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav7d-4Q5R1H9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav7d-4Q5R1H9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7d-4Q5R1H9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms