Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf20Q5DTM8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf20Q5DTM8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf20Q5DTM8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Gm8969-201ENSMUST00000199694 526 ntBASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Idnk-204ENSMUST00000226010 1898 ntBASIC21.15■□□□□ 0.98
Rnf20Q5DTM8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf20Q5DTM8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf20Q5DTM8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.14■□□□□ 0.98
Rnf20Q5DTM8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf20Q5DTM8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf20Q5DTM8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf20Q5DTM8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf20Q5DTM8 Dio3-201ENSMUST00000097228 1449 ntBASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf20Q5DTM8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Gm10418-201ENSMUST00000100943 576 ntBASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf20Q5DTM8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Gm12896-201ENSMUST00000118430 226 ntBASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf20Q5DTM8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms