Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Tmem40Q4FJU9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tmem40Q4FJU9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tmem40Q4FJU9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tmem40Q4FJU9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tmem40Q4FJU9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Tmem40Q4FJU9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.08■□□□□ 0.01
Tmem40Q4FJU9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.08■□□□□ 0
Tmem40Q4FJU9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.08■□□□□ 0
Tmem40Q4FJU9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.08■□□□□ 0
Tmem40Q4FJU9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tmem40Q4FJU9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gm10138-203ENSMUST00000206952 366 ntBASIC15.07■□□□□ 0
Tmem40Q4FJU9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Tmem40Q4FJU9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Gm21362-201ENSMUST00000194272 928 ntBASIC15.06■□□□□ 0
Tmem40Q4FJU9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Gm21814-202ENSMUST00000203277 873 ntBASIC15.06■□□□□ 0
Tmem40Q4FJU9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.06■□□□□ 0
Tmem40Q4FJU9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.06■□□□□ 0
Tmem40Q4FJU9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Zfp783-201ENSMUST00000095946 670 ntBASIC15.06■□□□□ 0
Tmem40Q4FJU9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tmem40Q4FJU9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms