Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B020004J07RikQ3UTC0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B020004J07RikQ3UTC0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
B020004J07RikQ3UTC0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B020004J07RikQ3UTC0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Gm29791-202ENSMUST00000207888 369 ntBASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B020004J07RikQ3UTC0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
B020004J07RikQ3UTC0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Gm18032-201ENSMUST00000222541 538 ntBASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms