Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zfp560Q3URI6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.82■□□□□ 0.44
Zfp560Q3URI6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
Zfp560Q3URI6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Gm27011-201ENSMUST00000182352 972 ntBASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zfp560Q3URI6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Gm15375-201ENSMUST00000119510 849 ntBASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zfp560Q3URI6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zfp560Q3URI6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Zfp560Q3URI6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Zfp560Q3URI6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zfp560Q3URI6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zfp560Q3URI6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zfp560Q3URI6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.77■□□□□ 0.43
Zfp560Q3URI6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Gm5643-201ENSMUST00000117081 966 ntBASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Gm13168-201ENSMUST00000121771 632 ntBASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zfp560Q3URI6 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.75■□□□□ 0.43
Zfp560Q3URI6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Zfp560Q3URI6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Zfp560Q3URI6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms