Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Gm6659-201ENSMUST00000174752 547 ntBASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Shisa6Q3UH99 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Gm27463-201ENSMUST00000183569 57 ntBASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Iqck-206ENSMUST00000208658 2891 ntBASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shisa6Q3UH99 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.05■□□□□ 0.16
Shisa6Q3UH99 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa6Q3UH99 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Gm24841-201ENSMUST00000158676 357 ntBASIC16.04■□□□□ 0.16
Shisa6Q3UH99 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa6Q3UH99 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Gm18959-201ENSMUST00000208954 655 ntBASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa6Q3UH99 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa6Q3UH99 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms