Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.01■□□□□ 0.95
Rnf180Q3U827 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rnf180Q3U827 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf180Q3U827 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Rnf180Q3U827 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21■□□□□ 0.95
Rnf180Q3U827 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21■□□□□ 0.95
Rnf180Q3U827 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Rnf180Q3U827 Dmtn-209ENSMUST00000228295 2572 ntBASIC21■□□□□ 0.95
Rnf180Q3U827 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Rnf180Q3U827 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf180Q3U827 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.99■□□□□ 0.95
Rnf180Q3U827 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Gm12260-201ENSMUST00000122447 411 ntBASIC20.99■□□□□ 0.95
Rnf180Q3U827 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Rnf180Q3U827 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf180Q3U827 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.98■□□□□ 0.95
Rnf180Q3U827 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf180Q3U827 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Gm14494-201ENSMUST00000118786 435 ntBASIC20.97■□□□□ 0.95
Rnf180Q3U827 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.97■□□□□ 0.95
Rnf180Q3U827 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf180Q3U827 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf180Q3U827 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.96■□□□□ 0.95
Rnf180Q3U827 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf180Q3U827 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rnf180Q3U827 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf180Q3U827 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf180Q3U827 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.93■□□□□ 0.94
Rnf180Q3U827 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf180Q3U827 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms