Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Golph3-202ENSMUST00000226517 2359 ntBASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col19a1Q0VF58 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col19a1Q0VF58 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.96■□□□□ 0.63
Col19a1Q0VF58 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gm10418-201ENSMUST00000100943 576 ntBASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gm15794-201ENSMUST00000120182 631 ntBASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gm12895-201ENSMUST00000122214 226 ntBASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Col19a1Q0VF58 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col19a1Q0VF58 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Actl10-202ENSMUST00000226583 1501 ntBASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col19a1Q0VF58 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col19a1Q0VF58 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
Col19a1Q0VF58 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.93■□□□□ 0.62
Col19a1Q0VF58 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col19a1Q0VF58 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col19a1Q0VF58 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms