Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.16□□□□□ -0.3
Hspg2Q05793 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hspg2Q05793 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Gm18958-201ENSMUST00000174258 762 ntBASIC13.15□□□□□ -0.3
Hspg2Q05793 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hspg2Q05793 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.15□□□□□ -0.3
Hspg2Q05793 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hspg2Q05793 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Mir3081-201ENSMUST00000175305 84 ntBASIC13.14□□□□□ -0.31
Hspg2Q05793 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.14□□□□□ -0.31
Hspg2Q05793 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hspg2Q05793 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hspg2Q05793 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.14□□□□□ -0.31
Hspg2Q05793 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hspg2Q05793 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hspg2Q05793 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hspg2Q05793 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Gm9013-201ENSMUST00000132939 882 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.12□□□□□ -0.31
Hspg2Q05793 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 Gm13474-201ENSMUST00000122466 815 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.12□□□□□ -0.31
Hspg2Q05793 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Gm27357-201ENSMUST00000183754 135 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.12□□□□□ -0.31
Hspg2Q05793 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.12□□□□□ -0.31
Hspg2Q05793 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.12□□□□□ -0.31
Hspg2Q05793 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hspg2Q05793 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hspg2Q05793 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hspg2Q05793 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hspg2Q05793 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hspg2Q05793 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms