Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col9a1Q05722 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col9a1Q05722 Gm7862-201ENSMUST00000121461 292 ntBASIC17.43■□□□□ 0.38
Col9a1Q05722 Gm12260-201ENSMUST00000122447 411 ntBASIC17.43■□□□□ 0.38
Col9a1Q05722 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.43■□□□□ 0.38
Col9a1Q05722 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.43■□□□□ 0.38
Col9a1Q05722 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.43■□□□□ 0.38
Col9a1Q05722 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col9a1Q05722 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.43■□□□□ 0.38
Col9a1Q05722 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col9a1Q05722 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col9a1Q05722 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col9a1Q05722 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col9a1Q05722 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col9a1Q05722 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.42■□□□□ 0.38
Col9a1Q05722 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Gm4995-201ENSMUST00000117247 432 ntBASIC17.42■□□□□ 0.38
Col9a1Q05722 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col9a1Q05722 Gm6376-201ENSMUST00000209407 580 ntBASIC17.42■□□□□ 0.38
Col9a1Q05722 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col9a1Q05722 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col9a1Q05722 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col9a1Q05722 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.41■□□□□ 0.38
Col9a1Q05722 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.41■□□□□ 0.38
Col9a1Q05722 Gm43767-201ENSMUST00000198933 381 ntBASIC17.41■□□□□ 0.38
Col9a1Q05722 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Col9a1Q05722 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col9a1Q05722 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.41■□□□□ 0.38
Col9a1Q05722 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col9a1Q05722 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Col9a1Q05722 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Gm26039-201ENSMUST00000158152 144 ntBASIC17.4■□□□□ 0.38
Col9a1Q05722 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.4■□□□□ 0.38
Col9a1Q05722 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col9a1Q05722 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col9a1Q05722 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col9a1Q05722 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a1Q05722 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Col9a1Q05722 Gm14494-201ENSMUST00000118786 435 ntBASIC17.39■□□□□ 0.37
Col9a1Q05722 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a1Q05722 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a1Q05722 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.39■□□□□ 0.37
Col9a1Q05722 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.39■□□□□ 0.37
Col9a1Q05722 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a1Q05722 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col9a1Q05722 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Col9a1Q05722 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col9a1Q05722 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
Col9a1Q05722 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.39■□□□□ 0.37
Col9a1Q05722 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Col9a1Q05722 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col9a1Q05722 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 Gm44872-201ENSMUST00000207864 420 ntBASIC17.38■□□□□ 0.37
Col9a1Q05722 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.38■□□□□ 0.37
Col9a1Q05722 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col9a1Q05722 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col9a1Q05722 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col9a1Q05722 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col9a1Q05722 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col9a1Q05722 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col9a1Q05722 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col9a1Q05722 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col9a1Q05722 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.37■□□□□ 0.37
Col9a1Q05722 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms