Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ldb1P70662 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ldb1P70662 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.7■□□□□ 0.42
Ldb1P70662 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ldb1P70662 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Flg-201ENSMUST00000050758 1488 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Idnk-204ENSMUST00000226010 1898 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ldb1P70662 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Gm11927-201ENSMUST00000118472 759 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.69■□□□□ 0.42
Ldb1P70662 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.69■□□□□ 0.42
Ldb1P70662 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.69■□□□□ 0.42
Ldb1P70662 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.69■□□□□ 0.42
Ldb1P70662 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ldb1P70662 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Ldb1P70662 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ldb1P70662 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ldb1P70662 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ldb1P70662 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ldb1P70662 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Ldb1P70662 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Gm12896-201ENSMUST00000118430 226 ntBASIC17.67■□□□□ 0.42
Ldb1P70662 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.67■□□□□ 0.42
Ldb1P70662 Gm2559-201ENSMUST00000201323 363 ntBASIC17.67■□□□□ 0.42
Ldb1P70662 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ldb1P70662 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb1P70662 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb1P70662 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.66■□□□□ 0.42
Ldb1P70662 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ldb1P70662 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.66■□□□□ 0.42
Ldb1P70662 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb1P70662 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ldb1P70662 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ldb1P70662 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ldb1P70662 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.65■□□□□ 0.42
Ldb1P70662 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.65■□□□□ 0.42
Ldb1P70662 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ldb1P70662 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ldb1P70662 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ldb1P70662 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ldb1P70662 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ldb1P70662 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb1P70662 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb1P70662 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb1P70662 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb1P70662 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.64■□□□□ 0.41
Ldb1P70662 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ldb1P70662 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.64■□□□□ 0.41
Ldb1P70662 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.64■□□□□ 0.41
Ldb1P70662 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ldb1P70662 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ldb1P70662 Dio3-201ENSMUST00000097228 1449 ntBASIC17.64■□□□□ 0.41
Ldb1P70662 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms