Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ThraP63058 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ThraP63058 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ThraP63058 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ThraP63058 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.96■□□□□ 0.47
ThraP63058 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
ThraP63058 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ThraP63058 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
ThraP63058 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.95■□□□□ 0.46
ThraP63058 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.95■□□□□ 0.46
ThraP63058 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ThraP63058 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ThraP63058 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ThraP63058 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ThraP63058 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ThraP63058 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
ThraP63058 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ThraP63058 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ThraP63058 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ThraP63058 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.94■□□□□ 0.46
ThraP63058 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
ThraP63058 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ThraP63058 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ThraP63058 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.93■□□□□ 0.46
ThraP63058 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.93■□□□□ 0.46
ThraP63058 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ThraP63058 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.93■□□□□ 0.46
ThraP63058 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ThraP63058 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
ThraP63058 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.92■□□□□ 0.46
ThraP63058 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ThraP63058 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ThraP63058 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ThraP63058 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.91■□□□□ 0.46
ThraP63058 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ThraP63058 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.91■□□□□ 0.46
ThraP63058 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Mir7071-201ENSMUST00000184847 69 ntBASIC17.91■□□□□ 0.46
ThraP63058 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ThraP63058 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.91■□□□□ 0.46
ThraP63058 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ThraP63058 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ThraP63058 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ThraP63058 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.9■□□□□ 0.46
ThraP63058 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Gm11249-201ENSMUST00000117071 859 ntBASIC17.9■□□□□ 0.46
ThraP63058 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ThraP63058 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ThraP63058 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ThraP63058 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms