Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.57■□□□□ 0.08
Lsm6P62313 Gm4968-201ENSMUST00000071458 858 ntBASIC15.57■□□□□ 0.08
Lsm6P62313 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.57■□□□□ 0.08
Lsm6P62313 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.57■□□□□ 0.08
Lsm6P62313 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lsm6P62313 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lsm6P62313 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.56■□□□□ 0.08
Lsm6P62313 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm6P62313 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.56■□□□□ 0.08
Lsm6P62313 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm6P62313 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lsm6P62313 Dio3-201ENSMUST00000097228 1449 ntBASIC15.55■□□□□ 0.08
Lsm6P62313 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm6P62313 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
Lsm6P62313 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm6P62313 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lsm6P62313 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm6P62313 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm6P62313 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Lsm6P62313 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.54■□□□□ 0.08
Lsm6P62313 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lsm6P62313 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lsm6P62313 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm6P62313 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Lsm6P62313 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lsm6P62313 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.53■□□□□ 0.08
Lsm6P62313 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.53■□□□□ 0.08
Lsm6P62313 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.53■□□□□ 0.08
Lsm6P62313 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm6P62313 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.53■□□□□ 0.08
Lsm6P62313 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm6P62313 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.53■□□□□ 0.08
Lsm6P62313 Gm29791-202ENSMUST00000207888 369 ntBASIC15.53■□□□□ 0.08
Lsm6P62313 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm6P62313 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm6P62313 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms