Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.37■□□□□ 0.85
Mmp20P57748 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.37■□□□□ 0.85
Mmp20P57748 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.37■□□□□ 0.85
Mmp20P57748 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.37■□□□□ 0.85
Mmp20P57748 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Mmp20P57748 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Mmp20P57748 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
Mmp20P57748 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp20P57748 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.36■□□□□ 0.85
Mmp20P57748 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp20P57748 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.36■□□□□ 0.85
Mmp20P57748 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp20P57748 Gm5587-201ENSMUST00000206270 674 ntBASIC20.36■□□□□ 0.85
Mmp20P57748 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Mmp20P57748 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mmp20P57748 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Mmp20P57748 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.36■□□□□ 0.85
Mmp20P57748 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp20P57748 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.35■□□□□ 0.85
Mmp20P57748 Mir1668-201ENSMUST00000184114 107 ntBASIC20.35■□□□□ 0.85
Mmp20P57748 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Gm29791-202ENSMUST00000207888 369 ntBASIC20.35■□□□□ 0.85
Mmp20P57748 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Mmp20P57748 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp20P57748 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Gm27704-201ENSMUST00000185094 107 ntBASIC20.34■□□□□ 0.85
Mmp20P57748 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
Mmp20P57748 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.34■□□□□ 0.85
Mmp20P57748 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.34■□□□□ 0.85
Mmp20P57748 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp20P57748 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Mmp20P57748 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.33■□□□□ 0.85
Mmp20P57748 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp20P57748 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Mmp20P57748 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.33■□□□□ 0.85
Mmp20P57748 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.33■□□□□ 0.85
Mmp20P57748 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Mmp20P57748 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp20P57748 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp20P57748 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp20P57748 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.32■□□□□ 0.84
Mmp20P57748 Gm9013-201ENSMUST00000132939 882 ntBASIC20.32■□□□□ 0.84
Mmp20P57748 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Mmp20P57748 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp20P57748 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.31■□□□□ 0.84
Mmp20P57748 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Mmp20P57748 Gm9731-201ENSMUST00000209480 747 ntBASIC20.31■□□□□ 0.84
Mmp20P57748 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp20P57748 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.3■□□□□ 0.84
Mmp20P57748 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Il3ra-202ENSMUST00000223589 738 ntBASIC20.3■□□□□ 0.84
Mmp20P57748 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Mmp20P57748 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms