Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Gm13234-201ENSMUST00000120010 747 ntBASIC14.86□□□□□ -0.03
Cks2P56390 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
Cks2P56390 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.86□□□□□ -0.03
Cks2P56390 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.86□□□□□ -0.03
Cks2P56390 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cks2P56390 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.85□□□□□ -0.03
Cks2P56390 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cks2P56390 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.85□□□□□ -0.03
Cks2P56390 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.85□□□□□ -0.03
Cks2P56390 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.85□□□□□ -0.03
Cks2P56390 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cks2P56390 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cks2P56390 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.84□□□□□ -0.03
Cks2P56390 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cks2P56390 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.84□□□□□ -0.03
Cks2P56390 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cks2P56390 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks2P56390 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cks2P56390 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks2P56390 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks2P56390 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.83□□□□□ -0.03
Cks2P56390 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cks2P56390 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cks2P56390 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cks2P56390 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.83□□□□□ -0.04
Cks2P56390 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cks2P56390 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cks2P56390 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cks2P56390 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cks2P56390 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cks2P56390 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cks2P56390 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cks2P56390 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cks2P56390 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cks2P56390 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks2P56390 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks2P56390 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cks2P56390 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms