Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NcanP55066 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NcanP55066 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NcanP55066 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NcanP55066 Gm9731-201ENSMUST00000209480 747 ntBASIC18.79■□□□□ 0.6
NcanP55066 Il3ra-202ENSMUST00000223589 738 ntBASIC18.79■□□□□ 0.6
NcanP55066 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NcanP55066 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NcanP55066 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.78■□□□□ 0.6
NcanP55066 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.78■□□□□ 0.6
NcanP55066 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NcanP55066 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.78■□□□□ 0.6
NcanP55066 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.78■□□□□ 0.6
NcanP55066 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.78■□□□□ 0.6
NcanP55066 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NcanP55066 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
NcanP55066 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NcanP55066 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NcanP55066 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.77■□□□□ 0.6
NcanP55066 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NcanP55066 Gm11452-201ENSMUST00000122376 690 ntBASIC18.77■□□□□ 0.6
NcanP55066 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
NcanP55066 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NcanP55066 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NcanP55066 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.76■□□□□ 0.59
NcanP55066 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.76■□□□□ 0.59
NcanP55066 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Gm43347-201ENSMUST00000200226 580 ntBASIC18.76■□□□□ 0.59
NcanP55066 Gm45328-201ENSMUST00000210942 917 ntBASIC18.76■□□□□ 0.59
NcanP55066 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.76■□□□□ 0.59
NcanP55066 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.76■□□□□ 0.59
NcanP55066 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.76■□□□□ 0.59
NcanP55066 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NcanP55066 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.75■□□□□ 0.59
NcanP55066 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Gm11594-201ENSMUST00000122313 162 ntBASIC18.75■□□□□ 0.59
NcanP55066 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Gm18195-201ENSMUST00000207604 706 ntBASIC18.75■□□□□ 0.59
NcanP55066 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.75■□□□□ 0.59
NcanP55066 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NcanP55066 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NcanP55066 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NcanP55066 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms