Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mir5130-201ENSMUST00000175160 84 ntBASIC18.07■□□□□ 0.48
Ddx6P54823 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx6P54823 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx6P54823 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx6P54823 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx6P54823 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.07■□□□□ 0.48
Ddx6P54823 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.07■□□□□ 0.48
Ddx6P54823 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ddx6P54823 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.06■□□□□ 0.48
Ddx6P54823 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Gm18032-201ENSMUST00000222541 538 ntBASIC18.06■□□□□ 0.48
Ddx6P54823 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.06■□□□□ 0.48
Ddx6P54823 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx6P54823 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx6P54823 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.05■□□□□ 0.48
Ddx6P54823 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ddx6P54823 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ddx6P54823 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ddx6P54823 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.05■□□□□ 0.48
Ddx6P54823 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx6P54823 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.04■□□□□ 0.48
Ddx6P54823 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.04■□□□□ 0.48
Ddx6P54823 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ddx6P54823 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.04■□□□□ 0.48
Ddx6P54823 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ddx6P54823 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Gm7638-201ENSMUST00000121348 967 ntBASIC18.04■□□□□ 0.48
Ddx6P54823 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.04■□□□□ 0.48
Ddx6P54823 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.04■□□□□ 0.48
Ddx6P54823 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx6P54823 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ddx6P54823 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx6P54823 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx6P54823 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx6P54823 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx6P54823 Gm16061-201ENSMUST00000122167 857 ntBASIC18.03■□□□□ 0.48
Ddx6P54823 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ddx6P54823 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx6P54823 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx6P54823 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx6P54823 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx6P54823 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.03■□□□□ 0.48
Ddx6P54823 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ddx6P54823 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ddx6P54823 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx6P54823 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.02■□□□□ 0.48
Ddx6P54823 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx6P54823 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx6P54823 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ddx6P54823 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx6P54823 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx6P54823 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ddx6P54823 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ddx6P54823 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx6P54823 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx6P54823 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx6P54823 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Gm13474-201ENSMUST00000122466 815 ntBASIC18.01■□□□□ 0.47
Ddx6P54823 Gm37025-201ENSMUST00000195159 829 ntBASIC18.01■□□□□ 0.47
Ddx6P54823 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.01■□□□□ 0.47
Ddx6P54823 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx6P54823 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms