Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CcnfP51944 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CcnfP51944 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CcnfP51944 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.93■□□□□ 0.3
CcnfP51944 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CcnfP51944 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CcnfP51944 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
CcnfP51944 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CcnfP51944 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CcnfP51944 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.92■□□□□ 0.3
CcnfP51944 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CcnfP51944 Reep4-203ENSMUST00000226563 1444 ntBASIC16.92■□□□□ 0.3
CcnfP51944 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CcnfP51944 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CcnfP51944 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.91■□□□□ 0.3
CcnfP51944 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CcnfP51944 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CcnfP51944 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.91■□□□□ 0.3
CcnfP51944 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.91■□□□□ 0.3
CcnfP51944 Gm43060-201ENSMUST00000200621 289 ntBASIC16.91■□□□□ 0.3
CcnfP51944 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.91■□□□□ 0.3
CcnfP51944 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.91■□□□□ 0.3
CcnfP51944 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CcnfP51944 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CcnfP51944 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.9■□□□□ 0.3
CcnfP51944 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.9■□□□□ 0.3
CcnfP51944 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CcnfP51944 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CcnfP51944 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CcnfP51944 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Gm27454-201ENSMUST00000185090 204 ntBASIC16.9■□□□□ 0.3
CcnfP51944 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.9■□□□□ 0.3
CcnfP51944 Gm43017-201ENSMUST00000198296 752 ntBASIC16.9■□□□□ 0.3
CcnfP51944 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CcnfP51944 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CcnfP51944 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CcnfP51944 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CcnfP51944 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CcnfP51944 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CcnfP51944 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CcnfP51944 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CcnfP51944 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CcnfP51944 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.89■□□□□ 0.29
CcnfP51944 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CcnfP51944 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CcnfP51944 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CcnfP51944 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
CcnfP51944 Gm12821-201ENSMUST00000120022 600 ntBASIC16.89■□□□□ 0.29
CcnfP51944 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms