Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Prox1P48437 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.06■□□□□ 0.32
Prox1P48437 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prox1P48437 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Prox1P48437 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.06■□□□□ 0.32
Prox1P48437 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.06■□□□□ 0.32
Prox1P48437 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Prox1P48437 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prox1P48437 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prox1P48437 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prox1P48437 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prox1P48437 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Prox1P48437 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prox1P48437 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Prox1P48437 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.05■□□□□ 0.32
Prox1P48437 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prox1P48437 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prox1P48437 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.05■□□□□ 0.32
Prox1P48437 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prox1P48437 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prox1P48437 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Prox1P48437 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.04■□□□□ 0.32
Prox1P48437 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Prox1P48437 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.04■□□□□ 0.32
Prox1P48437 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prox1P48437 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Prox1P48437 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Prox1P48437 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Prox1P48437 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.03■□□□□ 0.32
Prox1P48437 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.03■□□□□ 0.32
Prox1P48437 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.03■□□□□ 0.32
Prox1P48437 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prox1P48437 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.02■□□□□ 0.32
Prox1P48437 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
Prox1P48437 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Prox1P48437 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.02■□□□□ 0.32
Prox1P48437 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prox1P48437 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.02■□□□□ 0.32
Prox1P48437 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.02■□□□□ 0.32
Prox1P48437 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Prox1P48437 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prox1P48437 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prox1P48437 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.01■□□□□ 0.31
Prox1P48437 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prox1P48437 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms