Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Xcl1P47993 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Xcl1P47993 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.67□□□□□ -0.54
Xcl1P47993 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Xcl1P47993 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Xcl1P47993 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Xcl1P47993 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Xcl1P47993 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Xcl1P47993 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.65□□□□□ -0.54
Xcl1P47993 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Xcl1P47993 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Xcl1P47993 Gm32699-201ENSMUST00000221728 1988 ntBASIC11.65□□□□□ -0.55
Xcl1P47993 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Xcl1P47993 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.64□□□□□ -0.55
Xcl1P47993 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Xcl1P47993 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.64□□□□□ -0.55
Xcl1P47993 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.63□□□□□ -0.55
Xcl1P47993 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms